neuro-meta-analyses#
You can see the full contents of this project on GitHub.
<Project Name>
#
<1-2 sentences describing the project>
Papers#
How the papers were obtained#
Typically with pubget.
We recommend invoking pubget
with the --query_file
option, and storing a copy of the query file in the project’s directory, or including a copy in the README.md
.
<description>
Where the full papers are stored#
Typically on OSF.
Please also add a documents/datasets.json
file containing the URL where the full pubget
dataset can be downloaded, that looks like:
[ { "url": "https://osf.io/download/<...>/" } ]
<description>
Annotations#
File(s) being annotated:#
/projects/<project_name>/documents/<documents_file1_name>.jsonl
corresponding file in the pubget output:
<pubget_folder_name>/subset_allArticles_labelbuddyData/<documents_file1_name>.jsonl
/projects/<project_name>/documents/<documents_file2_name>.jsonl
corresponding file in the pubget output:
<pubget_folder_name>/subset_allArticles_labelbuddyData/<documents_file2_name>.jsonl
Annotation labels:#
<label1>: <description of label1>
<label2>: <description of label2>
Labels found in other projects as well:#
<label2>
Instructions for annotators#
<description>
Labels in this project#
DONE (but did not look into full paper) (677 docs)
Example annotations:
N studies included (545 docs)
Example annotations:
algorithm-ALE (427 docs)
Example annotations:
MA1 (293 docs)
Example annotations:
MA2 (261 docs)
Example annotations:
DONE (222 docs)
Example annotations:
software-gingerale (147 docs)
Example annotations:
exclude (146 docs)
Example annotations:
MA3 (141 docs)
Example annotations:
N contrasts included (131 docs)
Example annotations:
guidelines - prisma (110 docs)
Example annotations:
N studies found (100 docs)
Example annotations:
guidelines - none (74 docs)
Example annotations:
MA4 (65 docs)
Example annotations:
database - pubmed (65 docs)
Example annotations:
EXCLUDE - traditional ma (60 docs)
Example annotations:
exclusion - no min n (57 docs)
Example annotations:
algorithm-SDM (51 docs)
Example annotations:
has flow chart (47 docs)
Example annotations:
thresholding (42 docs)
Example annotations:
no null results (41 docs)
Example annotations:
largescale-MACM (40 docs)
Example annotations:
database - web of science (39 docs)
Example annotations:
search terms - exact (38 docs)
Example annotations:
algorithm-AES-SDM (37 docs)
Example annotations:
EXCLUDE - about ma's (35 docs)
Example annotations:
search terms - description (35 docs)
Example annotations:
MA5 (34 docs)
Example annotations:
EXCLUDE - not a full report (31 docs)
Example annotations:
prospero ID (30 docs)
Example annotations:
registration - prospero (30 docs)
Example annotations:
null results (30 docs)
Example annotations:
algorithm-MKDA (29 docs)
Example annotations:
NO N studies found (26 docs)
Example annotations:
database - embase (24 docs)
Example annotations:
read later (23 docs)
Example annotations:
algorithm-SDM-PSI (21 docs)
Example annotations:
MA6 (18 docs)
Example annotations:
exclusion - min n (17 docs)
Example annotations:
guidelines - moose (16 docs)
Example annotations:
algorithm-ES-SDM (15 docs)
Example annotations:
guidelines - cochrane (15 docs)
Example annotations:
database - psychinfo (14 docs)
Example annotations:
quality assessment - newcastle-ottawa scale (13 docs)
Example annotations:
database - medline (13 docs)
Example annotations:
MA7 (12 docs)
Example annotations:
largescale-neurosynth decoding (12 docs)
Example annotations:
has NO flow chart (12 docs)
Example annotations:
EXCLUDE - protocol (11 docs)
Example annotations:
database - scopus (11 docs)
Example annotations:
database - google scholar (9 docs)
Example annotations:
database - chinese national knowledge infrastructure (9 docs)
Example annotations:
database - sciencedirect (9 docs)
Example annotations:
largescale-neurosynth encoding (8 docs)
Example annotations:
largescale-brainmap decoding (8 docs)
Example annotations:
ask about this one (7 docs)
Example annotations:
MA8 (7 docs)
Example annotations:
IMBA (7 docs)
Example annotations:
EXCLUDE - review (7 docs)
Example annotations:
database - wanfang (7 docs)
Example annotations:
database - cochrane library (7 docs)
Example annotations:
MA10 (6 docs)
Example annotations:
database - brainmap (6 docs)
Example annotations:
registration - osf (6 docs)
Example annotations:
MA9 (5 docs)
Example annotations:
algorithm-other ma method (5 docs)
Example annotations:
software-brainmap (5 docs)
Example annotations:
MA11 (4 docs)
Example annotations:
label-based review/MA (4 docs)
Example annotations:
database - none reported (4 docs)
Example annotations:
guidelines - pico (4 docs)
Example annotations:
N group-level stat maps included (3 docs)
Example annotations:
MA12 (3 docs)
Example annotations:
MA13 (3 docs)
Example annotations:
algorithm-ABC (3 docs)
Example annotations:
database - china biology medicine disc (3 docs)
Example annotations:
database - chongqing vip (3 docs)
Example annotations:
algorithm-GPR (2 docs)
Example annotations:
software-CluB (2 docs)
Example annotations:
software-neuroelf (2 docs)
Example annotations:
software-MKDA toolbox (2 docs)
Example annotations:
software-none-or-unclear (2 docs)
Example annotations:
database - sinomed (2 docs)
Example annotations:
search terms - none (2 docs)
Example annotations:
registration - inplasy (2 docs)
Example annotations:
candidate for replication (1 docs)
Example annotations:
NO N studies included (1 docs)
Example annotations:
MA14 (1 docs)
Example annotations:
software-canlab mkda (1 docs)
Example annotations:
software-nimare (1 docs)
Example annotations:
software-other (1 docs)
Example annotations:
largescale-neurosynth MACM (1 docs)
Example annotations:
EXCLUDE - previous ma for seed / roi (1 docs)
Example annotations:
EXCLUDE - not a ma, doesn't fit other exclusion (1 docs)
Example annotations:
database - springerlink (1 docs)
Example annotations:
database - proquest (1 docs)
Example annotations:
guidelines - joanna briggs institute (1 docs)
Example annotations:
database - pubmed central (1 docs)
Example annotations:
database - ovid (1 docs)
Example annotations:
database - elsevier (1 docs)
Example annotations:
database - neurosynth (1 docs)
Example annotations:
database - neurovault (1 docs)
Example annotations:
stopped here (0 docs)
(No annotations with this label in the current project)
no-access (0 docs)
(No annotations with this label in the current project)
NO N contrasts included (0 docs)
(No annotations with this label in the current project)
N MAs (0 docs)
(No annotations with this label in the current project)
algorithm-KDA (0 docs)
(No annotations with this label in the current project)
software-abc (0 docs)
(No annotations with this label in the current project)
software-spm (0 docs)
(No annotations with this label in the current project)
largescale-neuroquery encoding (0 docs)
(No annotations with this label in the current project)
largescale-other-or-undefined (0 docs)
(No annotations with this label in the current project)
EXCLUDE - cites ma as justification (0 docs)
(No annotations with this label in the current project)
EXCLUDE - not about the brain (0 docs)
(No annotations with this label in the current project)
EXCLUDE - cites ma as consistent with findings (0 docs)
(No annotations with this label in the current project)
EXCLUDE - non-human focus (0 docs)
(No annotations with this label in the current project)
EXCLUDE - preprint (0 docs)
(No annotations with this label in the current project)
EXCLUDE - ma not in title (0 docs)
(No annotations with this label in the current project)
has prisma chart (0 docs)
(No annotations with this label in the current project)